Multi-page PDF of transcript-exclusive junctions

Writes a multi-page PDF: page 1 = full gene view (all transcripts, exclusive arcs in black); subsequent pages = one per exclusive-owning transcript, with its exclusive junction in black.

Usage

plot_exclusive_junctions_pdf(
  gtf,
  target_gene,
  out_pdf,
  curvature = -0.2,
  width = 10,
  height = NULL
)

Arguments

gtf, target_gene, curvature

See plot_exclusive_junctions().

out_pdf

Character path for the PDF.

width, height

PDF page dimensions. height = NULL (default) sizes to the full-gene page.

Value

Invisibly, a list with exclusive_transcripts and n_pages.

Required packages

Requires the ggplot2 package (declared in Suggests).